All functions

getAMR()

Search for aberrantly methylated regions

getUniverse()

Merges, filters and outputs all genomic regions of a given `GRanges` object

plotAMR()

Plot aberrantly methylated regions

ramr

Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples

simulateAMR()

Simulate a set of aberrantly methylated regions

simulateData()

Template-based simulation of methylation data sets