Reference

All functions
callMethylation()	callMethylation
extractPatterns()	extractPatterns
generateBedEcdf()	generateBedEcdf
generateAmpliconReport() generateCaptureReport() generateBedReport()	generateBedReport
generateCytosineReport()	generateCytosineReport
generateMhlReport()	generateMhlReport
generateVcfReport()	generateVcfReport
preprocessBam()	preprocessBam
preprocessGenome()	preprocessGenome
simulateBam()	simulateBam